Celebration of Scholars
Molecular Dynamics Simulations of Chiral Molecular Micelles
Name:
Kevin Krause
Major: Computer Science
Hometown: Germantown, TN
Faculty Sponsor:
Kevin Morris
Other Sponsors:
Type of research: SURE
Funding: NIH grant 8G12-MD007597, NSF RUI Grant #1213532, and the generosity of the Ralph E. Klingenmeyer Family
Abstract
The physiological properties of mirror image molecules, or
enantiomers, can vary dramatically. Thus, it is important that racemates are
separated into their respective enantiopure forms so that the properties of R
and S enantiomers can be studied separately. In capillary electrophoresis,
enantiomers are separated upon their different interactions with chiral
molecular micelles. A molecular micelle is a macromolecule where surfactant
monomers are bound to one another. This project is part of an ongoing effort to
characterize how the enantiomers of chiral drugs bind to molecular micelles.
The molecular micelle poly-(sodium undecyl-(L,L)-leucine-leucine) (poly(SULL))
was investigated along with the chiral molecules oxprenolol, propranolol,
1,1’-bi-2-naphthol, and lorazepam. Each pair of enantiomers was placed in one
of the six predicted binding pockets of poly(SULL). For each intermolecular
complex, molecular dynamics simulations were used to calculate the solvent
accessible surface areas of each ligand, the inter- and intramolecular hydrogen
bonds formed, and binding free energy of the ligand to each pocket. These
results allowed us to propose a predictive model of chiral recognition in
poly(SULL) and similar molecular micelles.